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8 clients · secrets stay placeholders

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{
  "mcpServers": {
    "noodle": {
      "type": "http",
      "url": "https://api.helena.bio/noodle/v1/mcp"
    }
  }
}

claude mcp add --transport http noodle https://api.helena.bio/noodle/v1/mcp

[mcp_servers.noodle]
url = "https://api.helena.bio/noodle/v1/mcp"

{
  "$schema": "https://opencode.ai/config.json",
  "mcp": {
    "noodle": {
      "type": "remote",
      "url": "https://api.helena.bio/noodle/v1/mcp",
      "enabled": true
    }
  }
}

{
  "mcpServers": {
    "noodle": {
      "type": "http",
      "url": "https://api.helena.bio/noodle/v1/mcp"
    }
  },
  "deeplink": "cursor://anysphere.cursor-deeplink/mcp/install?name=noodle&config=eyJ0eXBlIjoiaHR0cCIsInVybCI6Imh0dHBzOi8vYXBpLmhlbGVuYS5iaW8vbm9vZGxlL3YxL21jcCJ9"
}

{
  "servers": {
    "noodle": {
      "type": "http",
      "url": "https://api.helena.bio/noodle/v1/mcp"
    }
  }
}

{
  "mcpServers": {
    "noodle": {
      "httpUrl": "https://api.helena.bio/noodle/v1/mcp"
    }
  }
}

extensions:
  "noodle":
    enabled: true
    name: "noodle"
    type: streamable_http
    uri: "https://api.helena.bio/noodle/v1/mcp"
    timeout: 300

Quality 100 / 100strong

protocol100 · weight 25

pass
protocol.modernsupports 2026-07-28 (server/discover)
pass
protocol.statelessanswers without a session
pass
protocol.transportstreamable HTTP
pass
protocol.list_ttltool list is cacheable (ttlMs 86400000)

authorizationn/a · weight 15

n/a
auth.prm, auth.as_metadata, auth.cimdno remote uses OAuth
n/a
auth.secret_in_urlno templated URL

tool hygiene100 · weight 30

pass
tools.descriptionsevery tool has a description
pass
tools.description_lengthdescriptions are concise
pass
tools.schemasevery tool has an object input schema
pass
tools.annotations7 of 7 tools declare readOnlyHint or destructiveHint
pass
tools.directory_hintsevery tool declares readOnlyHint, destructiveHint, idempotentHint and openWorldHint
pass
tools.token_costabout 1,265 tokens to load every tool
pass
tools.api_dumptools are not a one-to-one API dump

stability100 · weight 15

pass
stability.changesno tool changes in 30 days
pass
stability.rug_pullno tool changed its meaning under the same name

dependenciesn/a · weight 15

n/a
deps.known_vulns, deps.mcp_sdk_version, deps.resolvableno npm or PyPI package

7 tools, about 1,265 tokens to load them all · tool set ad8898e09405 · checked 2026-10-20 11:40 UTC

Tool changes

No tool definition changes recorded. A server's first observation is its baseline; later probes record what changes.

Checks run on what our credential-free, read-only probes observe; tools are never called and no code audit is performed. How it is computed.

Trust 94 / 100

provenance90

liveness100

freshness85

hygiene100

+repository +namespace-matches-repo +website +reachable +uptime-99% ~updated-51d-ago

Derived from observable signals (official registry feed and our own credential-free probes); no code audit performed. How it is computed.

Endpoints

remote	auth	reachable	uptime 30d	p50	protocol	last ok
`https://api.helena.bio/noodle/v1/mcp` streamable-http	none	yes	99%	479 ms	2026-07-28	2026-10-20

Tools (7)

`get_corpus_summary`read-only	Return public corpus coverage, source, freshness, and count metadata. Results are for literature discovery and professional review, not diagnosis or treatment.
`get_publication_details`read-only	Retrieve one complete public bibliographic record by PMID after search. Results are for literature discovery and professional review, not diagnosis or treatment.
`get_publication_neighborhood`read-only	Retrieve the bounded citation and semantic neighborhood around one PMID. Results are for literature discovery and professional review, not diagnosis or treatment.
`get_work_details`read-only	Retrieve one complete public bibliographic record by Noodle work identifier. Results are for literature discovery and professional review, not diagnosis or treatment.
`get_work_neighborhood`read-only	Retrieve the bounded citation and semantic neighborhood around one Noodle work identifier. Results are for literature discovery and professional review, not diagnosis or treatment.
`search_biomedical_literature`read-only	Semantically search Noodle's public PubMed-derived biomedical corpus. Include known PMID, DOI, or PMCID identifiers in the query so they can act as exact anchors. Results are for literature discovery and professional review, not diagnosis or treatment.
`support_helena`read-only	Learn about the separate Helena Good MCP. This opt-in information action initiates no payment or outreach and changes no scientific result.

Schemas: list_tools.

Similar MCP servers

More from io.github.helena-bioinformatics

Official server.json

{
  "name": "io.github.helena-bioinformatics/noodle",
  "icons": [
    {
      "src": "https://noodle.helena.bio/favicon.svg",
      "mimeType": "image/svg+xml"
    }
  ],
  "title": "Noodle Biomedical Literature Discovery MCP",
  "$schema": "https://static.modelcontextprotocol.io/schemas/2025-12-11/server.schema.json",
  "remotes": [
    {
      "url": "https://api.helena.bio/noodle/v1/mcp",
      "type": "streamable-http"
    }
  ],
  "version": "0.2.1",
  "repository": {
    "id": "1350901429",
    "url": "https://github.com/helena-bioinformatics/noodle-mcp",
    "source": "github"
  },
  "websiteUrl": "https://noodle.helena.bio",
  "description": "Search biomedical papers, inspect publication records, and traverse citation or semantic graphs."
}